Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910477.1_cds_XP_016460523.1_53937
CDS Infomation

[gene=LOC107783995] [db_xref=GeneID:107783995] [protein=laccase-4-like] [protein_id=XP_016460523.1] [location=complement(join(22809..22939,23407..24366,25122..25250,25472..25716,26188..26333))] [gbkey=CDS]
Sequence

ATGAAAAATGTTACAAGATTATGTCAAACAAAGAGCATTGTGACAGTCAATGGCCAACTT
CCAGGACCTACAATTACTGCAAGAGAAGGAGACAGACTTCTCATCAAAGTTGTTAACCAT
GTTCAGTACAATATCTCTATTCACTGGCATGGAGTGAGACAACTAAGAAGCGCATGGGCA
GATGGACCAGCTTATATTACACAATGCCCTATTCAAACTGGCCAAAGCTATGTATACAAT
TTCACTCTCACTGGGCAAAGGGGAACATTGTTTTGGCACGCTCACATCTCATGGCTGAGA
GTTACAGTCTATGGAGCTATTGTTATCCTTCCCAAGAAAGGCGTCGCTTATCCTTTTCCT
CAACCCTTCAAAGAATTTCCTATCATTTTTGGTGAATGGTGGAATGAAGATACAGAGACA
AATATCAATCAAGCCCTACAAACTGGAGGAGCTCCAAATATTTCGGATGCTCATACTATC
AACGGTCTTCCTGGACTTTTCTACAATTGCTCCACTAAAAATACATTCAGATTAAAAGTG
AAACCTGGGAAAACATATCTACTGAGATTAATCAATGCTGCACTCGATGATGAGCTCTTC
TTCAGTATAGCTAACCACACCCTTACTGTTGTAGAAGTTGATGCAGGTTATATAAAACCA
TTTGAGACAAATACAATCTTAATAACTCCAGGACAAACCACAAATCTCCTACTAAAAACC
ATGCCTCACCACCCTAACGCCACCTTTCTCATGGCAGCGCGGCCGTACTCCTCCGGCCCC
GCCACCTTCGACAATACAACAACCACCGCAATCTTGGAATATGAAAATCAACCATCCACC
AAAAAAAGTAACAAATTTCCTGTATTAAGACCTACACTCCCTATTTTCAATGACACAAAT
TTTGTTGCCAATTTTAGCAAGAAAATCAAAAGTCTAGCAAATGCACAATTCCCAGCTAAT
GTACCAAAAAAAGTTGATAGTCGATTTTTCTTCACTGTTGGACTAGGATTACATCCATGC
CCCCAGAACCAAACATGTCAAGGACCAAATAATACAAAATTTGCAGCCTCTATTAATAAT
GTCTCCTTTATTCAGCCAAATATAGCATTACTTCAAGCTCACTTTTTCAACCAATCAAAG
GGTGTTTATACTACTGATTTTCCAGCCAATCCACCATTCAAATTTAATTACACAGGCAAC
CCACCAACCAATATATTTGTGACAAGTGGCACAAAAGTTGTAGTGCTTCCTTATAATACT
AGAGTGGAATTGGTTTTACAAGACACTAGTATTCTTGGTGCTGAAAGCCATCCTCTTCAT
CTTCATGGGTTCAACTTTTTTGTGGTTGGTCAAGGATTTGGAAACTATAATCCTAGTCAA
GATCCAGCAAACTTCAACCTTGTTGACCCTGCTGAAAGGAACACTGTTGGTGTGCCAGCT
GGTGGCTGGGTCGCCATTCGCTTCCTTGCAGACAATCCAGGAACGTGGTTCATGCATTGT
CACCTTGAAGTTCACACGAGCTGGGGATTGAAAATGGCTTGGATTGTAAAGGATGGAAAA
GGCCGCAAACAGAAGCTTCCTCCTCCACCTGCTGATCTTCCTAAGTGTTAA

Peptide Sequence

PEP ID

XP_016460523.1
PEP Infomation

PREDICTED: laccase-4-like [Nicotiana tabacum]
Sequence

MKNVTRLCQTKSIVTVNGQLPGPTITAREGDRLLIKVVNHVQYNISIHWHGVRQLRSAWA
DGPAYITQCPIQTGQSYVYNFTLTGQRGTLFWHAHISWLRVTVYGAIVILPKKGVAYPFP
QPFKEFPIIFGEWWNEDTETNINQALQTGGAPNISDAHTINGLPGLFYNCSTKNTFRLKV
KPGKTYLLRLINAALDDELFFSIANHTLTVVEVDAGYIKPFETNTILITPGQTTNLLLKT
MPHHPNATFLMAARPYSSGPATFDNTTTTAILEYENQPSTKKSNKFPVLRPTLPIFNDTN
FVANFSKKIKSLANAQFPANVPKKVDSRFFFTVGLGLHPCPQNQTCQGPNNTKFAASINN
VSFIQPNIALLQAHFFNQSKGVYTTDFPANPPFKFNYTGNPPTNIFVTSGTKVVVLPYNT
RVELVLQDTSILGAESHPLHLHGFNFFVVGQGFGNYNPSQDPANFNLVDPAERNTVGVPA
GGWVAIRFLADNPGTWFMHCHLEVHTSWGLKMAWIVKDGKGRKQKLPPPPADLPKC

Transcript Sequence

Gene sequence data has not been registered.